CDS

Accession Number TCMCG017C16384
gbkey CDS
Protein Id OMO91387.1
Location complement(join(92738..93241,93599..93732,94233..95665,95756..95910,96199..96279,96368..96445,96530..96964))
GeneID InterPro:IPR002068
Organism Corchorus olitorius
locus_tag COLO4_18417

Protein

Length 939aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01016460.1
Definition hypothetical protein COLO4_18417 [Corchorus olitorius]
Locus_tag COLO4_18417

EGGNOG-MAPPER Annotation

COG_category J
Description Ribonuclease P protein subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K03539        [VIEW IN KEGG]
EC 3.1.26.5        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03008        [VIEW IN KEGG]
ko03013        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0000172        [VIEW IN EMBL-EBI]
GO:0000966        [VIEW IN EMBL-EBI]
GO:0001682        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005655        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0030677        [VIEW IN EMBL-EBI]
GO:0030681        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034471        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099116        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902555        [VIEW IN EMBL-EBI]
GO:1905348        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGTTTTTCGACCTTAACATTCCCTACACCGATTCCACGCCGCCAAACACCGCGAATTCCTCCGCTGCTAAAACCGCGCGCATCAAAATCGTCATCAAAGCAATGGAGCTGGGCTACACGGGGATCGCCTACAACCGTACGATAAAGGGCGTCATGTCTGATCGTGATCGTTGTTCAATCCCTCTCCTTACTCTCTCCTCTCTCCTCAAAGCCGCCCCCTTTCTCTCCTCTTCCGTCAACCTCCACCGCGACCTCCTCGGCGTCCCTCGCTTCTCTCCTTTCCGCCAGTACACGCGCCTCACTGTCTGTGTCGACAATGCGTCGCAGTCACAGGCCTTAAATTCGGGAAATCCGGTATTGAAGACGTATGATATTGTTGCCGTTAGGCCATTGAACCAGATTACATTCGATCACGCATGCGAGAAAGCCGAGGTGGATATAATTTCGATTGATTTCTCAGATAGGGTGCCATTTCGATTGAAATTGCCTATGGTTAAAGCTGCTATTAAGCGTGGGGTTTATTTTGAAATTGCTTATTCTGGTCTTATTGTAGATGTTCAACTAAGGAGGCAAATGATATCCAATGCTAAGTTGTTGGTGGATTGGACTAGAGGGAAGAATGTCATATTTACTAGTGCTGCCCCTTCTGTATGCGAAGTTAGAGGGCCAAACGATGTTGCAAACTTAGCATCTTTGCTCGGTCTCTCTGTAGAACGAGCTAAAGTAGCAATTTCCAAAAATTGTAGGAGTCTTCTGGCTACTGCTTTGAGGAGAAAGCACTTTTTCAAGGAGGTCATCAGAGTTGAAGCAGTGTCGTCTAGTGTGCCGTTTGATAGTGGGAAACCTTTGTCTGCAGATTGGCTTAAATGGGATCCCATCTCTAGTGGTGAAGGTGATTTATTGCTGGATGACATGGCAAAATCCTTTTCTGCCTCTAGTAACGTCTCCAAAACTGTGAAAGCCATTGACTTTGATTCTGTTGTCGACAACATGCCATCACATGGCTTCCAAGTTAAGGATTTGATCTCTGGAACTAAGACAGCCTCCCTCGCAACAACCCTTTTGTCAACTAATGAGCCAGTTGAGTTCTCCACTACAACTAATCAGATGTCTGAAAAATCCAGCACACTCAATATTCTTCCTGAAACAGACAAGGCTTTGTCAGATGATAGACCTTCAGAACGTCTAGCTTTCATATTTGGGGATTCCCAAGAGTTATACATGGCAAATGATGCTACAAAAGCCTTAACCGATTCTGAGGAAGTGGTAACTAATTCAACCACAACTAAGGAAGAACCACAGACTCAAAATGACTCACATGCAGTTTGTGCCTCACTTGAAACTGAAGGTCAGGGCCTGCAATCAGAAAATTCCAGTCCTAGTTATGAACAGAATACCGTGTTGGTAAATGAGGATGTGAGAATTGAGGCATCAGGCAATGAACAAAATGTTGCTTTAGGGAGTCTGACATCTCAGGATGTATCAGTAATGCCTATTGAGAATGAGGCATCTCAGACATCAGCCATGGACATTGAAGTAAATGCTGCTATAGAGATTTCTCCTCCATCTGAGGATAATAGTTTACCTCCTACTCAGAACAAAGATACTAATAGTTCAAAAGAATCTCGTCTAGATTTGGATGCAGAGACAATTAAGGTGGATGATGAAGCAGTTCGTATGGATACTGAGATGACACACCAGGAAAATACACCTTTGTCCATAAATAATGTGTCTTTGGCCGAAAATATATCAGAAAGGATATCATGGAGGGTTCCTGAAGATGCTGCAGTAATTGCTGATCAAATTTCCTTTCAGCAGTGTGATGATGAGGTGAGAGTTAAAAATGACTCTTTGGTGGCAAATAATGAAAACCAAGTGGAGGTGGTAATGGAAGAGCAAAAGCTTGGAGAAGCTGATGGCAAAATGAATATACCACCCACAGTTTTAAGTGATGGGCCTTGGCATGAAAATGCCATTGTGAGAGAACCAACCACATTACCTGGAGATGCTGGAGGTCTTGCGGGTTCCAATCCATGTCCGAACTCTGATGAGGAGATGAAAGCTATAGACATTTCTTCAAGGACAATTGATGAGATCCAAGAGGTGTCATTGGAAGGACAAAAGCATGGAGACCATGATAGCAAAAACAATGAGCTTACCTTAGGTCAACATATATCAGGTTCAGGACACAATCCAGAAGTTGCGTTTCGATGTTTAATAAGGGTCCGCAAACGGCTACCAAACACCCCTTACGAAAGGCTTAAGGCTCAAGCTCCCTTTAATAATAATGTTGGTCGGTTCCAGCTTAAACAGCTTTCAGAAATGGCCTTGATTCCTAACTTGTTGGGCAACCTACGCAACACCATTATCGACCCATCTTCTCTCGACGCCTTTGATCCTTTCAAATACATGGATTCCTCATCCGCGGCTACGATGCTTGAACTATCCCGCCTTCGAGGAGATCAGAAATCTGCTATCCCGATCGCCAACCCCCATATGGACTGGAAGGAGACTTCGGAGGGTCACATGTTCATGGCTGAAGTTCCAGGGTTGAAAAAAGAGGAAGTGATCGTGGAGATTGAGGACAACAGTGTGCTTCAAATCAGCGGAGAGAAGAACGTGAACAAGGAAGAGAAGAACGACAGGTGGCATTGCGTGGAGCGGAGCAGTGGGAAATTCTCCAGGAGGTTTAGGCTGCCGGACAATGTGAATATAAGCCATGTCAAGGCTTCATTGGAAAATGGGGTTCTAACTGTCACTGTTCCTAAACTAGAGACGAAGAAACCTGAGATTATCACTGTTCAAATTTCTGGTTAA
Protein:  
MGFFDLNIPYTDSTPPNTANSSAAKTARIKIVIKAMELGYTGIAYNRTIKGVMSDRDRCSIPLLTLSSLLKAAPFLSSSVNLHRDLLGVPRFSPFRQYTRLTVCVDNASQSQALNSGNPVLKTYDIVAVRPLNQITFDHACEKAEVDIISIDFSDRVPFRLKLPMVKAAIKRGVYFEIAYSGLIVDVQLRRQMISNAKLLVDWTRGKNVIFTSAAPSVCEVRGPNDVANLASLLGLSVERAKVAISKNCRSLLATALRRKHFFKEVIRVEAVSSSVPFDSGKPLSADWLKWDPISSGEGDLLLDDMAKSFSASSNVSKTVKAIDFDSVVDNMPSHGFQVKDLISGTKTASLATTLLSTNEPVEFSTTTNQMSEKSSTLNILPETDKALSDDRPSERLAFIFGDSQELYMANDATKALTDSEEVVTNSTTTKEEPQTQNDSHAVCASLETEGQGLQSENSSPSYEQNTVLVNEDVRIEASGNEQNVALGSLTSQDVSVMPIENEASQTSAMDIEVNAAIEISPPSEDNSLPPTQNKDTNSSKESRLDLDAETIKVDDEAVRMDTEMTHQENTPLSINNVSLAENISERISWRVPEDAAVIADQISFQQCDDEVRVKNDSLVANNENQVEVVMEEQKLGEADGKMNIPPTVLSDGPWHENAIVREPTTLPGDAGGLAGSNPCPNSDEEMKAIDISSRTIDEIQEVSLEGQKHGDHDSKNNELTLGQHISGSGHNPEVAFRCLIRVRKRLPNTPYERLKAQAPFNNNVGRFQLKQLSEMALIPNLLGNLRNTIIDPSSLDAFDPFKYMDSSSAATMLELSRLRGDQKSAIPIANPHMDWKETSEGHMFMAEVPGLKKEEVIVEIEDNSVLQISGEKNVNKEEKNDRWHCVERSSGKFSRRFRLPDNVNISHVKASLENGVLTVTVPKLETKKPEIITVQISG